Emap2sec is a computational tool that can identify protein secondary structures in cryo-Electron Microscopy (EM) maps of medium to low resolution.
If encounter problems, please contact Daisuke Kihara (dkihara@purdue.edu).
Example EMD-1733 Input Map file:1733.mrc
Contour level: 2.5
Result Example:Result Example
Tutorial
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Reference: https://www.nature.com/articles/s41592-019-0500-1
Please simply click "Schedule Job" when you filled all input fields.
Please make sure your contour level is lower than your focused region. This is absolute density threshold, not standard deviation.
Please input valid contour level since it is used for normalization in Emap2sec. 0 is not suggested and may ruin the visualization..
