No instructions have been provided for this algorithm yet.
DAQfinder is a sequence database searching protocol using traced backbone models from a EM map of up to 5 A resolution.
Please adjust the contour level for the best fit. Set a contour level that is sufficiently low to cover the entire protein region as a continuous volume. DAQFinder does not check map regions below (lower than) the contour level you specified. On the other hand, if you specify the contour level too low, it will take longer time for the program to check every voxels above the contour level.
After adjusting the contour level on the sliding window click "Update Contour Value" to visualize the volume. Note that the map may not be visualized when the map is large and the specified contour level is too low or the specified contour level is too high and the browser runs out of memory.
The sequence database to search. The default database is PDB95. You can also use Uniprot or Custom (upload your FASTA file below).
Please upload your FASTA file if you select Custom.
