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EMSuite Server

The RoadMap that you can access below contains 13 algorithms developed by Kihara Lab for structure modeling, validation and refinement of cryo-EM maps. After viewing the RoadMap you can choose any of the 13 algorithms to submit your job. For best results please view the Tutorial before submitting a job. Additionally, you will receive detailed instructions in the submission page on how to interpret output and prepare inputs.

Dynamic Image
Dynamic Image
Category Structure Type Resolution Methods
Structure Modeling Protein 0-5 Å DeepMainMast
DeepMainMast Image
MainMast (single-chain only)
MainMast Image
0-20 Å DiffModeler(template input)
DiffModeler Image
DiffModeler(sequence input)
DiffModeler(seq) Image
DNA/RNA 0-5 Å CryoREAD
Protein-DNA/RNA Complex 0-5 Å ComplexModeler
Structure Validation Protein 0-5 Å DAQ-Score
Structure Refinement Protein 0-5 Å DAQ-Refine
Unknown Protein Finding Protein 0-5 Å DAQFinder
Secondary Structure Detection Protein 5-10 Å Emap2sec
Protein-DNA/RNA Complex 5-10 Å Emap2sec+
Structure Fitting Map vs. Map 0-20 Å VESPER
Structure vs. Map 0-20 Å VESPER(S2M)
Category Structure Type Methods
Structure Modeling Protein DeepMainMast
0-5 Å
DeepMainMast Image
MainMast (single-chain only)
0-5 Å
MainMast Image
DiffModeler (template input)
0-20 Å
DiffModeler Image
DiffModeler (sequence input)
0-20 Å
DiffModeler(seq) Image
DNA/RNA CryoREAD
0-5 Å
Protein-DNA/RNA Complex ComplexModeler
0-5 Å
Structure Validation Protein DAQ-Score
0-5 Å
Structure Refinement Protein DAQ-Refine
0-5 Å
Unknown Protein Finding Protein DAQFinder
0-5 Å
Secondary Structure Detection Protein Emap2sec
5-10 Å
Protein-DNA/RNA Complex Emap2sec+
5-10 Å
Structure Fitting Map vs. Map VESPER
0-20 Å
Structure vs. Map VESPER(S2M)
0-20 Å



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