Added a check in DeepMainMast to verify that AF2 sequences match the FASTA file.
Version 10.1.0 - November 14th, 2024
The webpage now checks the format of FASTA files.
Version 10.0.1 - November 1st, 2024
Added YouTube tutorial for CryoREAD
Youtube tutorial is available in the Tutorial section and in the Job Submission page for CryoREAD
Version 10.0.0 - October 29th, 2024
DAQFinder now has the option to search for sequence in UniProt. It also supports to search on PDB95 or user input FASTA file.
DiffModeler(seq) now filters out DNA sequences.
Version 9.0.0 - August 21st, 2024
Added a YouTube video for the EM server tutorial.
Version 8.0.0 - August 6th, 2024
Added ability to visualize input map with the inputted contour level. The contour level can be changed dynamically to choose the best one. This feature is added for: DeepMainmast, CryoREAD, ComplexModeler, Emap2sec, Emap2sec+, Mainmast, DiffModeler and DiffModeler(seq).
Version 7.5.0 - August 5th, 2024
Added comprehensive/clear status to all future jobs.
Statuses currently present: "Queued", "Running", "Failed", "Success". Followed by a reviewer message if it is present.
Version 7.0.0 - June 26th, 2024
Implemented mobile responsiveness. The whole website can be accessed and used through the user's mobile.
Version 6.0.0 - May 9th, 2024
New DAQFinder algorithm for finding unknown proteins in your molecular map.
Complete Redesign of EMServer.
Better looking and clearer homepage, contact page, view job page and navigation bar.
Version 5.0.0 - April 28th, 2024
CryoREAD (a de novo DNA/RNA structure modeling tool) can now handle maps up to 10 Å resolution.
CryoREAD was originally developed for modeling for maps up to 5 Å resolution, but now we upgraded the neural network to better predict nucleotides up to 10 Å.
Version 4.0.5 - March 28th, 2024
Tutorials for Main Algorithms added. They can be accessed by clicking the "Tutorial" button on the navigation bar.
The tutorial outlines the workflow of the algorithm, input/output files, job submission and information on submitting for review.
Version 4.0.0 - December 13th, 2023
Overall web design updated.
Added Instructions, How To Interpret and RoadMap (table outlining all of our algorithms). The instructions can be viewed for each algorithm at the job submission page.
You can also view the instructions at the job viewing page. The instructions mainly outline how to interpret.
Version 3.5.0 - November 11th, 2023
Users no longer have to be logged in to submit a job.
The job they submitted will be remembered once they register.
We still highly recommend registering for notifications and easy access.
Version 3.0.0 - October 26th, 2023
Update to the overall design of the webserver.
Mostly visual changes to the home page and tutorial page.
Version 2.5.0 - October 24th, 2023
The contour level can now be changed for maps from the side panel. From the View Job page click the ellipsis ("...") to the right of "Isosurface" within the volume section.Subsequently, click the ellipsis ("...") next to "Type" within the isosurface settings. Finally, adjust the iso-value to the appropriate values to visualize the map online.
Version 2.0.0 - August 22nd, 2023
Maps can now be visualized for all Algorithms by clicking the "View Map" button on the top right of the viewer.
