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EMSuite Server

The RoadMap that you can access below contains 13 algorithms developed by Kihara Lab for structure modeling, validation and refinement of cryo-EM maps. After viewing the RoadMap you can choose any of the 13 algorithms to submit your job. For best results please view the Tutorial before submitting a job. Additionally, you will receive detailed instructions in the submission page on how to interpret output and prepare inputs.

Category Structure Type Resolution Methods
Structure Modeling Protein 0-5 Å DeepMainMast

0-5 Å

DeepMainMast Image
MainMast (single-chain only)

0-5 Å

MainMast Image
0-15 Å DiffModeler (template input)

0-15 Å

DiffModeler Image
DiffModeler (sequence input)

0-15 Å

DiffModeler(seq) Image
DNA/RNA 0-5 Å CryoREAD

0-5 Å

Protein-DNA/RNA Complex 0-5 Å ComplexModeler

0-5 Å

Structure Validation Protein 0-5 Å DAQ-Score

0-5 Å

Structure Refinement Protein 0-5 Å DAQ-Refine

0-5 Å

Unknown Protein Finding Protein 0-5 Å DAQFinder

0-5 Å

Secondary Structure Detection Protein 5-10 Å Emap2sec

5-10 Å

Protein-DNA/RNA Complex 5-10 Å Emap2sec+

5-10 Å

Structure Fitting Map vs. Map 0-20 Å VESPER

0-20 Å

Structure vs. Map 0-20 Å VESPER(S2M)

0-20 Å




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